PharmaDD Top News: Business, Technology, Strategic Briefings - Tracking leading techniques and approaches in therapeutic drug discovery and development

 

Sponsored Links:
Prescription Drug Addiction

 

 

Pharmaceutical Discovery, May 1, 2005 
Identification of Glycosylated Peptides Using a Linear Ion Trap Mass Spectrometer

By Gargi Choudhary , Jae Schwartz , Diane Cho

Monolithic Nanocolumns in LC–ESI-MS
Jean-Pierre Chervet, Irina Dragan, Thomas Jakob, Remco Swart
Pharmaceutical Discovery


Introduction Polymeric monolithic stationary phases offer an alternative to the classical microparticulate sorbents, bringing important advantages to sample analysis. In contrast to the traditional stationary phases that consist of packed particles, the monolithic separation medium is made of a continuous, rigid polymeric rod with a porous structure. The lack of intraparticular void volume improves mass transfer and separation efficiency. Monolithic nanocolumns, like their 200-µm i.d. capillary counterparts, allow for extremely fast separations of proteins and peptides.

 

Figure 1. A Monolithic nanocolumn in protective housing, 100-µm i.d. × 5 cm.
Instrumentation All experiments were performed on the UltiMate™ Plus Nano and Capillary LC System equipped with a microchip flow sensor for flow adjustment and a 3-nL ultraviolet (UV) flow cell. The cytochrome c digest was injected using a FAMOS™ Micro Autosampler. The Monolithic nanocolumn, 100-µm i.d. by 5 cm (Figure 1), made of polystyrene-divinylbenzene polymer (PS-DVB), was thermostatted at 60 °C using the UltiMate column oven. UV detection was performed at 214 nm. The peptides were eluted with a fast gradient at a flow rate of 1 µL/min.

 

Figure 2. Capillary LC separation of cytochrome c sample (800 fmol/µL). Injected amount was 0.3 µL.
Fast LC Analysis Figure 2 shows the fast separation of a cytochrome c digest sample. A gradient from 0 to 45% acetonitrile in acidified water (0.04% TFA) is performed in 8 min., resulting in a fast separation of each peptide with baseline resolution. Figure 2 demonstrates the good selectivity of the polymeric bed. The mobile phase composition is ideally suited for direct coupling to electrospray ionization mass spectrometry (ESI-MS).

 

Experimental Conditions
Monolithic columns allow for the separation of proteins with widely differing properties ranging from small and hydrophilic (cytochrome c) to large and rather hydrophobic proteins (not shown). By extension of the gradient, the separation of tryptic peptides and (hydrophobic) proteins is possible in the same run.

The major advantage of the monolithic material, based on the PS/DVB copolymer, is the excellent chromatographic separation efficiency for proteins and peptides. This technology allows for a high peak capacity in a short analysis time. Fast and high-resolution separations make these columns ideally suited for on-line coupling to ESI-MS applications in proteomics.

LC Packings – A Dionex Company 500 Mercury Dr.
Sunnyvale, CA 94088-3603 USA
Tel. 408-737-0700; Fax 408-737-1293


www.lcpackings.com